Publications

Highlighted Publications: 

Mehrabani-Tabari A, et al. Peroxisomal ether-glycerophospholipid synthesis is dysregulated after TBI. J Lipid Res. 2025 May 7;:100821. doi: 10.1016/j.jlr.2025.100821. PubMed PMID: 40345661.

Garrett TJ, Jones JW. Review of the 2023 Fall Workshop on Lipidomics─The Essentials to the Cutting Edge. J Am Soc Mass Spectrom. 2024 Apr 3;35(4):653-654. doi: 10.1021/jasms.4c00074. PubMed PMID: 38566574.

Gouda H, et al. Differential utilization of vitamin B(12)-dependent and independent pathways for propionate metabolism across human cells. J Biol Chem. 2024 Sep;300(9):107662. doi: 10.1016/j.jbc.2024.107662. Epub 2024 Aug 14. PubMed PMID: 39128713; PubMed Central PMCID: PMC11408853.

Kopczynski D, et al. The lipidomics reporting checklist a framework for transparency of lipidomic experiments and repurposing resource data. J Lipid Res. 2024 Sep;65(9):100621. doi: 10.1016/j.jlr.2024.100621. Epub 2024 Aug 14. PubMed PMID: 39151590; PubMed Central PMCID: PMC11417233.

Lei Z, et al. Spinal cord injury disrupts plasma extracellular vesicles cargoes leading to neuroinflammation in the brain and neurological dysfunction in aged male mice. Brain Behav Immun. 2024 Aug;120:584-603. doi: 10.1016/j.bbi.2024.07.005. Epub 2024 Jul 8. PubMed PMID: 38986724; PubMed Central PMCID: PMC11269008.

Ji Y, et al. Development and evaluation of a liquid chromatography-tandem mass spectrometry method for simultaneous measurement of toxic aldehydes from brain tissue. J Chromatogr B Analyt Technol Biomed Life Sci. 2024 Jul 15;1242:124208. doi: 10.1016/j.jchromb.2024.124208. Epub 2024 Jun 13. PubMed PMID: 38880056; PubMed Central PMCID: PMC11227393.

Oleson BJ, et al. Early life changes in histone landscape protect against age-associated amyloid toxicities through HSF-1-dependent regulation of lipid metabolism. Nat Aging. 2024 Jan;4(1):48-61. doi: 10.1038/s43587-023-00537-4. Epub 2023 Dec 6. PubMed PMID: 38057386; PubMed Central PMCID: PMC11481004.

Abdel-Megied AM, et al. Characterization of the cellular lipid composition during SARS-CoV-2 infection. Anal Bioanal Chem. 2023 Sep;415(22):5269-5279. doi: 10.1007/s00216-023-04825-1. Epub 2023 Jul 13. PubMed PMID: 37438564; PubMed Central PMCID: PMC10981079.

Morel Y, Jones JW. Utilization of LC-MS/MS and Drift Tube Ion Mobility for Characterizing Intact Oxidized Arachidonate-Containing Glycerophosphatidylethanolamine. J Am Soc Mass Spectrom. 2023 Aug 2;34(8):1609-1620. doi: 10.1021/jasms.3c00083. Epub 2023 Jun 27. PubMed PMID: 37369083.

Becette OB, et al. Rapid identification of short oligonucleotide impurities using lithium adduct consolidated MALDI-TOF mass spectrometry. Int. J. Mass Spectrom., 481, 2022, 116913. ISSN 1387-3806. Doi: 10.1016/j.ijms.2022.116913.

Becette OB, et al. Structural Fingerprinting of siRNA Therapeutics by Solution NMR Spectroscopy. Nucleic Acid Ther. 2022 Aug;32(4):267-279. doi: 10.1089/nat.2021.0098. Epub 2022 Mar 9. PubMed PMID: 35263184; PubMed Central PMCID: PMC9416564.

Becette OB, Tran A, Jones JW, Marino JP, & Brinson RG . Structural Fingerprinting of Short Interfering RNA Therapeutics by Solution Nuclear Magnetic Resonance Spectroscopy. Nucleic acid therapeutics, 10.1089/nat.2021.0098. 2022 Mar 9. PMID: 35263184 DOI: 10.1089/nat.2021.0098

Morel Y, Hegdekar N, Sarkar C, Lipinski MM, Kane MA, Jones JW. Structure-specific, accurate quantitation of plasmalogen glycerophosphoethanolamine. Analytica chimica acta, 1186, 339088. 2021 Sep 22. PMID: 34756256 PMCID: PMC8581249 DOI: 10.1016/j.aca.2021.339088

Carballal S, Vitvitsky V, Kumar R, Hanna DA, Libiad M, Gupta A., Jones JW, & Banerjee R. Hydrogen sulfide stimulates lipid biogenesis from glutamine that is dependent on the mitochondrial NAD(P)H pool. The Journal of biological chemistry, 297(2), 100950. 2021 Jul 10. PMID: 34252456 PMCID: PMC8342795 DOI: 10.1016/j.jbc.2021.100950

Tran A, Monreal IA, Moskovets E, Aguilar HC, Jones JW. Rapid Detection of Viral Envelope Lipids Using Lithium Adducts and AP-MALDI High-Resolution Mass Spectrometry. J Am Soc Mass Spectrom. 2021 Apr 22. doi: 10.1021/jasms.1c00058. PubMed PMID: 33886294.

Tran A, Wan L, Xu Z, Haro JM, Li B, Jones JW. Lithium Hydroxide Hydrolysis Combined with MALDI TOF Mass Spectrometry for Rapid Sphingolipid Detection. J Am Soc Mass Spectrom. 2020 Oct 30. doi: 10.1021/jasms.0c00322. PubMed PMID: 33124427.

Li L, Wang H, Jones JW. Sphingolipid metabolism as a marker of hepatotoxicity in drug-induced liver injury. Prostaglandins Other Lipid Mediat. 2020 Sep 30;151:106484. doi: 10.1016/j.prostaglandins.2020.106484. PubMed PMID: 33007444.

Sarkar C, Jones JW, Hegdekar N, Thayer JA, Kumar A, Faden AI, Kane MA, Lipinski MM. PLA2G4A/cPLA2-mediated lysosomal membrane damage leads to inhibition of autophagy and neurodegeneration after brain trauma. Autophagy. 2020 Mar;16(3):466-485. doi: 10.1080/15548627.2019.1628538. Epub 2019 Jun 25. PubMed PMID: 31238788; PubMed Central PMCID: PMC6999646.

Jones JW, Sarkar C, Lipinski MM, Kane MA. Detection and Structural Characterization of Ether Glycerophosphoethanolamine from Cortical Lysosomes Following Traumatic Brain Injury Using UPLC-HDMSE. Proteomics. 2019 Sep;19(18):e1800297. doi: 10.1002/pmic.201800297. Epub 2019 Mar 19. PubMed PMID: 30790445; PubMed Central PMCID: PMC7565256.

Jones JW, Jackson IL, Vujaskovic Z, Kaytor MD, Kane MA. Targeted Metabolomics Identifies Pharmacodynamic Biomarkers for BIO 300 Mitigation of Radiation-Induced Lung Injury. Pharm Res. 2017 Dec;34(12):2698-2709. doi: 10.1007/s11095-017-2200-9. PubMed PMID: 28971289.

Jones JW, Carter CL, Li F, Yu J, Pierzchalski K, Jackson IL, Vujaskovic Z, Kane MA. Ultraperformance convergence chromatography-high resolution tandem mass spectrometry for lipid biomarker profiling and identification. Biomed Chromatogr. 2017 Mar;31(3). doi: 10.1002/bmc.3822. PubMed PMID: 27557409; PubMed Central PMCID: PMC5359636.

Jones JW, Thompson CJ, Carter CL, Kane MA. Electron-induced dissociation (EID) for structure characterization of glycerophosphatidylcholine: determination of double-bond positions and localization of acyl chains. J Mass Spectrom. 2015 Dec;50(12):1327-39. doi: 10.1002/jms.3698. PubMed PMID: 26634966; PubMed Central PMCID: PMC4745129.

Jones JW, Pierzchalski K, Yu J, Kane MA. Use of fast HPLC multiple reaction monitoring cubed for endogenous retinoic acid quantification in complex matrices. Anal Chem. 2015 Mar 17;87(6):3222-30. doi: 10.1021/ac504597q. PubMed PMID: 25704261

Jones JW, Tudor G, Bennett A, Farese AM, Moroni M, Booth C, MacVittie TJ, Kane MA. Development and validation of a LC-MS/MS assay for quantitation of plasma citrulline for application to animal models of the acute radiation syndrome across multiple species. Anal Bioanal Chem. 2014 Jul;406(19):4663-75. doi: 10.1007/s00216-014-7870-0. PubMed PMID: 24842404.

Jones JW, Cohen IE, Tureĉek F, Goodlett DR, Ernst RK. Comprehensive structure characterization of lipid A extracted from Yersinia pestis for determination of its phosphorylation configuration. J Am Soc Mass Spectrom. 2010 May;21(5):785-99. doi: 10.1016/j.jasms.2010.01.008. PubMed PMID: 20185334.

Jones JW, Shaffer SA, Ernst RK, Goodlett DR, Turecek F. Determination of pyrophosphorylated forms of lipid A in Gram-negative bacteria using a multivaried mass spectrometric approach. Proc Natl Acad Sci U S A. 2008 Sep 2;105(35):12742-7. doi: 10.1073/pnas.0800445105. PubMed PMID: 18753624; PubMed Central PMCID: PMC2529124.